Publications

Research work from some of our members

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PUBLICATION

Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli

DOI: 10.1038/ncomms13090

Date
2016

Journal
Nature Communications

Tags
CLINICAL/SYSTEMS BIOLOGY
MACHINE LEARNING/AI

PUBLICATION

Compendium of synovial signatures identifies pathologic characteristics for predicting treatment response in rheumatoid arthritis patients

DOI: 10.1016/j.clim.2019.03.002

Date
2019

Journal
Clinical Immunology

Tags
CLINICAL/SYSTEMS BIOLOGY
DRUG RESPONSIVENESS
MACHINE LEARNING/AI

PUBLICATION

Predicting early risk of chronic kidney disease in cats using routine clinical laboratory tests and machine learning

DOI: doi:10.1111/jvim.15623

Date
2019

Journal
Journal of veterinary internal medicine

Tags
CLINICAL/SYSTEMS BIOLOGY
MACHINE LEARNING/AI

PUBLICATION

The computational diet: A review of computational methods across diet, microbiome, and health

DOI: 10.3389/fmicb.2020.00393

Date
2020

Journal
Frontiers in Microbiology

Tags
MACHINE LEARNING/AI
SYSTEMS BIOLOGY

PUBLICATION

Accelerated knowledge discovery from omics data by optimal experimental design

DOI: 10.1038/s41467-020-18785-y

Date
2020

Journal
Nature Communications

Tags
MACHINE LEARNING/AI

PUBLICATION

Using word embeddings to learn a better food ontology

DOI: 10.3389/frai.2020.584784

Date
2020

Journal
Frontiers in Artificial Intelligence

Tags
MACHINE LEARNING/AI
NUTRITION/FOOD

PUBLICATION

Methane and fatty acid metabolism pathways are predictive of Low-FODMAP diet efficacy for patients with irritable bowel syndrome

DOI: 10.1016/j.clnu.2020.12.041

Date
2021

Journal
Clinical Nutrition

Tags
SYSTEMS BIOLOGY

Date
2022

Journal
Scientific Reports

Tags
PREDICTIVE MARKERS, MACHINE LEARNING